|
| Status |
Public on Oct 11, 2011 |
| Title |
Splenic marginal zone lymphoma SMZL_NimbleGen4x_52 |
| Sample type |
genomic |
| |
|
| Channel 1 |
| Source name |
DNA SMZL
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: peripheral blood
disease state: Splenic marginal zone lymphomas
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
The DNA was extracted using the standard phenol-chloroform method. All DNA was quantified using the Nanodrop spectrophotometer (ND-1000, NanoDrop Technologies, Wilmington, DE USA). DNA quality was assessed by the 260:280 ratio and its integrity by agarose gel ethidium bromide visualization.
|
| Label |
Cy3
|
| Label protocol |
standard NimbleGen protocol, see manufacturer's web site at http://www.nimblegen.com
|
| |
|
| Channel 2 |
| Source name |
Control DNA
|
| Organism |
Homo sapiens |
| Characteristics |
disease state: healthy
sample type: human placenta of healthy donors
tissue: placenta
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
The DNA was extracted using the standard phenol-chloroform method. All DNA was quantified using the Nanodrop spectrophotometer (ND-1000, NanoDrop Technologies, Wilmington, DE USA). DNA quality was assessed by the 260:280 ratio and its integrity by agarose gel ethidium bromide visualization.
|
| Label |
Cy5
|
| Label protocol |
standard NimbleGen protocol, see manufacturer's web site at http://www.nimblegen.com
|
| |
|
| |
| Hybridization protocol |
standard NimbleGen protocol, see manufacturer's web site at http://www.nimblegen.com
|
| Scan protocol |
standard NimbleGen protocol, see manufacturer's web site at http://www.nimblegen.com
|
| Data processing |
standard NimbleGen protocol, see manufacturer's web site at http://www.nimblegen.com
|
| |
|
| Submission date |
Aug 04, 2011 |
| Last update date |
Oct 11, 2011 |
| Contact name |
Cristina Robledo |
| E-mail(s) |
crisrmontero@hotmail.com
|
| Organization name |
CIC
|
| Street address |
Campus Miguel de Unamuno
|
| City |
Salamanca |
| ZIP/Postal code |
37007 |
| Country |
Spain |
| |
|
| Platform ID |
GPL13906 |
| Series (1) |
| GSE31203 |
Molecular characterization of the chromosome 7 in SMZL |
|
