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GEO accession:
Sample GSM77704
Query DataSets for GSM77704
Status
Public on Dec 31, 2005
Title
H2O2 high replicate 2
Sample type
RNA
Source name
Daphnia magna neonate
Organism
Daphnia magna
Characteristics
Wild type, female, neonate, whole body
Treatment protocol
Exposed to 2.4 mg/l of hydrogen peroxide for 24 h.
Extracted molecule
total RNA
Extraction protocol
Approximately 10 neonates were lysed in RLT buffer (Qiagen).Total RNA was extracted from the tissue lysate using an RNeasy kit (Qiagen).
Label
Cy3
Label protocol
Approximately 0.5ug of total RNA was processed to produce cRNA targets.
Scan protocol
standard GenePix procedures
Description
Wild type neonate (<24h)
Data processing
GeneSpring version7.2
Submission date
Oct 12, 2005
Last update date
Oct 13, 2005
Contact name
Hajime Watanabe
E-mail(s)
watanabe@nibb.ac.jp
Phone
81-564-59-5237
Fax
81-564-59-5236
Organization name
National Institutes of Natural Sciences
Department
Center for Integrative Bioscience
Street address
5-1, Higashiyama
City
Okazaki
State/province
Aichi
ZIP/Postal code
444-8787
Country
Japan
Platform ID
GPL2888
Series (1)
GSE3445
Daphnia magna DNA microarray for the evaluation of toxicity of environmental chemicals
Data table header descriptions
ID_REF
VALUE
GeneSpring-calculated Signal intensity
Data table
ID_REF
VALUE
111
68
112
187
113
4145
115
22
116
31
121
284
122
469
123
647
125
874
126
7677
131
3321
132
97
133
15
135
155
136
139
141
42
142
280
143
106
145
318
146
218
Total number of rows:
178
Table truncated, full table size
1 Kbytes
.
Supplementary data files not provided
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