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GEO accession:
Sample GSM77705
Query DataSets for GSM77705
Status
Public on Dec 31, 2005
Title
H2O2 high replicate 3
Sample type
RNA
Source name
Daphnia magna neonate
Organism
Daphnia magna
Characteristics
Wild type, female, neonate, whole body
Treatment protocol
Exposed to 2.4 mg/l of hydrogen peroxide for 24 h.
Extracted molecule
total RNA
Extraction protocol
Approximately 10 neonates were lysed in RLT buffer (Qiagen).Total RNA was extracted from the tissue lysate using an RNeasy kit (Qiagen).
Label
Cy3
Label protocol
Approximately 0.5ug of total RNA was processed to produce cRNA targets.
Scan protocol
standard GenePix procedures
Description
Wild type neonate (<24h)
Data processing
GeneSpring version7.2
Submission date
Oct 12, 2005
Last update date
Oct 13, 2005
Contact name
Hajime Watanabe
E-mail(s)
watanabe@nibb.ac.jp
Phone
81-564-59-5237
Fax
81-564-59-5236
Organization name
National Institutes of Natural Sciences
Department
Center for Integrative Bioscience
Street address
5-1, Higashiyama
City
Okazaki
State/province
Aichi
ZIP/Postal code
444-8787
Country
Japan
Platform ID
GPL2888
Series (1)
GSE3445
Daphnia magna DNA microarray for the evaluation of toxicity of environmental chemicals
Data table header descriptions
ID_REF
VALUE
GeneSpring-calculated Signal intensity
Data table
ID_REF
VALUE
111
82
112
113
113
4339
115
24
116
27
121
255
122
436
123
593
125
1117
126
8922
131
3420
132
59
133
13
135
88
136
123
141
32
142
274
143
112
145
306
146
273
Total number of rows:
178
Table truncated, full table size
1 Kbytes
.
Supplementary data files not provided
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