|
| Status |
Public on Mar 21, 2024 |
| Title |
20-month-old fibroblasts reprogrammed to iPSCs replicate 3 |
| Sample type |
genomic |
| |
|
| Source name |
Dermal fibroblasts from male C57BL/6 mice
|
| Organism |
Mus musculus |
| Characteristics |
Sex: male
strain: C57BL/6
cell type: Dermal fibroblasts
age: 20-month-old
treatment: reprogrammed to iPSCs
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
DNA was isolated from fibroblasts using the DNeasy Blood & Tissue kit according to the manufacturer's protocol (Qiagen)
|
| Label |
Cy3 and Cy5
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
Standard Illumina protocol
|
| Scan protocol |
Standard Illumina protocol
|
| Description |
207505380014_R03C02
|
| Data processing |
Raw methylation array data were normalized using SeSAMe (Zhou et al., 2018 Nucleic Acids Res. 46(20))
Normalized (SeSAMe, noob background subtraction) data in RDS format.
|
| |
|
| Submission date |
Nov 07, 2023 |
| Last update date |
Mar 21, 2024 |
| Contact name |
Wayne Mitchell |
| E-mail(s) |
wmitchell2@bwh.harvard.edu
|
| Organization name |
Brigham and Women's Hospital
|
| Street address |
77 Avenue Louis Pasteur
|
| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02115 |
| Country |
USA |
| |
|
| Platform ID |
GPL32543 |
| Series (2) |
| GSE247179 |
Multi-omics characterization of partial chemical reprogramming reveals evidence of cell rejuvenation [Array] |
| GSE247199 |
Multi-omics characterization of partial chemical reprogramming reveals evidence of cell rejuvenation |
|
