NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM792734 Query DataSets for GSM792734
Status Public on May 18, 2012
Title 131I_medulla_130kBq_24h
Sample type RNA
 
Source name Mouse kidney medulla, 130kBq, 24h
Organism Mus musculus
Characteristics strain: Balb/c
tissue: kidney medulla
injected activity: 130kBq
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with RNeasy Lipid Tissue Mini Kit according to the manufacturer’s instructions. Quality control was performed with Agilent Bioanalyzer.
Label biotin
Label protocol Standard Illumina labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalized using quantile normalization with BASE
 
Submission date Sep 09, 2011
Last update date May 18, 2012
Contact name Emil Schüler
E-mail(s) emil.schuler@gu.se
Organization name University of Gothenburg
Street address Gula stråket 2B
City Göteborg
ZIP/Postal code 41346
Country Sweden
 
Platform ID GPL6885
Series (1)
GSE32014 Effects of internal low dose irradiation from 131I on gene expression in normal mouse tissue

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2659724 102.375 0.19798234
ILMN_2706226 89.0625 0.90542245
ILMN_1217123 96.25 0.49936947
ILMN_2780205 6926.5625 0
ILMN_2713160 93.5 0.7112232
ILMN_2650094 92.4375 0.7515763
ILMN_2703479 92.5 0.7515763
ILMN_2952493 100.625 0.29886508
ILMN_2731592 107.9375 0.06683481
ILMN_2729743 141.875 0
ILMN_1252621 224.25 0
ILMN_3162407 523.1875 0
ILMN_2692952 113.1875 0.016393442
ILMN_2910076 93.625 0.7112232
ILMN_2709047 221.0625 0
ILMN_2718462 191.25 0
ILMN_2882078 197.75 0
ILMN_2882079 115.0625 0.008827238
ILMN_2771368 98.9375 0.36948296
ILMN_2724039 91.1875 0.8221942

Total number of rows: 25697

Table truncated, full table size 701 Kbytes.




Supplementary file Size Download File type/resource
GSM792734_4700303073_B_Grn.idat.gz 1.2 Mb (ftp)(http) IDAT
GSM792734_4700303073_B_beadTypeFile.txt.gz 161.4 Kb (ftp)(http) TXT
GSM792734_4700303073_B_perBeadFile.txt.gz 12.3 Mb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap