|
| Status |
Public on Sep 13, 2024 |
| Title |
TB4_J365 |
| Sample type |
genomic |
| |
|
| Channel 1 |
| Source name |
DA1-3B clone
|
| Organism |
Mus musculus |
| Characteristics |
cell line: DA1-3B
disease state: myeloid leukemia
|
| Treatment protocol |
none
|
| Growth protocol |
none
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
chromosomal DNA were extracted using Qiagen DNA extraction Kit following manufacturer's instructions
|
| Label |
Cy5
|
| Label protocol |
probe labeling used Agilent Technologies Genomic DNA Enzymatic Labeling Kit. Labelling was performed following manufacturer's instructions.
|
| |
|
| Channel 2 |
| Source name |
DA1-3B rate control
|
| Organism |
Mus musculus |
| Characteristics |
control: DA1-3B rate control
|
| Treatment protocol |
none
|
| Growth protocol |
none
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
chromosomal DNA were extracted using Qiagen DNA extraction Kit following manufacturer's instructions
|
| Label |
Cy3
|
| Label protocol |
probe labeling used Agilent Technologies Genomic DNA Enzymatic Labeling Kit. Labelling was performed following manufacturer's instructions.
|
| |
|
| |
| Hybridization protocol |
Scanned on an Agilent G2505B scanner.
|
| Scan protocol |
Images were quantified using Agilent Feature Extraction Software (version V.10.7.3.1).
|
| Data processing |
Agilent Feature Extraction Software (v 10.7.3.1) was used for background subtraction and LOWESS normalization.
|
| |
|
| Submission date |
Dec 14, 2023 |
| Last update date |
Sep 13, 2024 |
| Contact name |
frédéric leprêtre |
| E-mail(s) |
frederic.lepretre@univ-lille.fr
|
| Organization name |
Lille University
|
| Department |
CHU of Lille, CBP
|
| Lab |
plateforme de génomique fonctionnelle et structurale
|
| Street address |
Boulevard du Pr Leclercq
|
| City |
lille |
| ZIP/Postal code |
59037 |
| Country |
France |
| |
|
| Platform ID |
GPL10449 |
| Series (1) |
| GSE250172 |
Myeloid leukemia and melanoma genomic characterization in murine cell lines |
|
