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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Mar 21, 2024 |
| Title |
HL7G Replicate 3 |
| Sample type |
SRA |
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| Source name |
MM1 cells
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| Organism |
Homo sapiens |
| Characteristics |
cell line: MM1 cells
treatment: HL7G
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| Treatment protocol |
stimulation for 1 hour
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| Growth protocol |
MM1 cells were cultured in RPMI, 10% FCS, at 37°C with 5% CO2.
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| Extracted molecule |
polyA RNA |
| Extraction protocol |
Trizol protocol
Illumina TruSeq stranded mRNA library prep kit
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| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina NovaSeq 6000 |
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| Data processing |
Reads were mapped to GRCh38 hg38 with star on the fly
Assembly: GRCh38 - hg38
Supplementary files format and content: Tab delimited text file
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| Submission date |
Jan 10, 2024 |
| Last update date |
Mar 21, 2024 |
| Contact name |
Wolfram Ruf |
| E-mail(s) |
ruf@uni-mainz.de
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| Organization name |
CTH Mainz
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| Street address |
Langenbeckstrasse 1
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| City |
Mainz |
| ZIP/Postal code |
55131 |
| Country |
Germany |
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| Platform ID |
GPL24676 |
| Series (1) |
| GSE252972 |
Targeting the tissue factor coagulation initiation complex prevents antiphospholipid antibody development |
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| Relations |
| BioSample |
SAMN39404209 |
| SRA |
SRX23162034 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSM8011721_MM1_3_HL7G.ReadsPerGene.out.tab.gz |
362.0 Kb |
(ftp)(http) |
TAB |
SRA Run Selector |
| Raw data are available in SRA |
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