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Sample GSM802932 Query DataSets for GSM802932
Status Public on Jun 30, 2012
Title Cardiac septum_HCM (4158307042_D)
Sample type RNA
 
Source name Cardiac septum_HCM
Organism Homo sapiens
Characteristics gender: male
disease state: HCM
Extracted molecule total RNA
Extraction protocol Cardiac tissue was put in RNAlater
Label Cy3
Label protocol Illumina TotalPrep RNA Amplification Kit was used
 
Hybridization protocol Performed according to Illumina protocol
Scan protocol Illumina Beadstation 500GX according to Illumina protocol
Description 4158307042_D
Data processing Cubic spline normalization, subtracted background.
Illumina Genomestudio was used
 
Submission date Sep 28, 2011
Last update date Jun 30, 2012
Contact name Nina Gennebäck
E-mail(s) nina.genneback@ncl.ac.uk
Organization name Umeå University
Department Public health and clinical medicin/medicin
Street address NUS 6M
City Umeå
ZIP/Postal code 901 86
Country Sweden
 
Platform ID GPL6104
Series (1)
GSE32453 Study of transcriptional expression in HCM

Data table header descriptions
ID_REF
VALUE normalized signal
4158307042_D.Detection Pval
4158307042_D.BEAD_STDERR
4158307042_D.Avg_NBEADS

Data table
ID_REF VALUE 4158307042_D.Detection Pval 4158307042_D.BEAD_STDERR 4158307042_D.Avg_NBEADS
ILMN_1809034 30.94123 0.02683616 5.95806 39
ILMN_1660305 178.4618 0.001412429 14.86766 44
ILMN_1792173 129.6574 0.005649718 15.33793 32
ILMN_1762337 -14.88138 0.9872881 3.448337 47
ILMN_1736007 -0.2678794 0.3968927 5.817845 41
ILMN_1787689 19.80977 0.05508475 4.512862 48
ILMN_1731507 36.80074 0.02118644 7.188326 33
ILMN_1814316 241.3426 0.001412429 15.63631 45
ILMN_1745607 6622.281 0 368.5627 32
ILMN_1757454 -3.787093 0.5593221 4.241379 46
ILMN_1735045 345.7731 0 20.36958 53
ILMN_1680754 23.84895 0.03954802 6.911045 37
ILMN_1659452 6.875697 0.1793785 5.268416 38
ILMN_1767388 43.45144 0.01977401 6.298092 37
ILMN_1673870 6.032192 0.1977401 6.564685 34
ILMN_1675204 3.324835 0.279661 5.045848 41
ILMN_1755321 96.58396 0.009887005 9.23744 39
ILMN_1698554 243.8181 0.001412429 18.11447 55
ILMN_1805938 -3.067616 0.5268362 5.189494 44
ILMN_1676336 724.1667 0 43.39962 41

Total number of rows: 22184

Table truncated, full table size 923 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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