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Sample GSM802937 Query DataSets for GSM802937
Status Public on Jun 30, 2012
Title Cardiac septum_HCM (4310479091_B)
Sample type RNA
 
Source name Cardiac septum_HCM
Organism Homo sapiens
Characteristics gender: male
disease state: HCM
Extracted molecule total RNA
Extraction protocol Cardiac tissue was put in RNAlater
Label Cy3
Label protocol Illumina TotalPrep RNA Amplification Kit was used
 
Hybridization protocol Performed according to Illumina protocol
Scan protocol Illumina Beadstation 500GX according to Illumina protocol
Description 4310479091_B
Data processing Cubic spline normalization, subtracted background.
Illumina Genomestudio was used
 
Submission date Sep 28, 2011
Last update date Jun 30, 2012
Contact name Nina Gennebäck
E-mail(s) nina.genneback@ncl.ac.uk
Organization name Umeå University
Department Public health and clinical medicin/medicin
Street address NUS 6M
City Umeå
ZIP/Postal code 901 86
Country Sweden
 
Platform ID GPL6104
Series (1)
GSE32453 Study of transcriptional expression in HCM

Data table header descriptions
ID_REF
VALUE normalized signal
4310479091_B.Detection Pval
4310479091_B.BEAD_STDERR
4310479091_B.Avg_NBEADS

Data table
ID_REF VALUE 4310479091_B.Detection Pval 4310479091_B.BEAD_STDERR 4310479091_B.Avg_NBEADS
ILMN_1809034 19.3273 0.04661017 4.896297 49
ILMN_1660305 95.39206 0.008474576 7.995854 33
ILMN_1792173 194.0729 0.001412429 11.73551 45
ILMN_1762337 -10.22641 0.9251412 3.600926 35
ILMN_1736007 -4.630143 0.7132769 2.771352 50
ILMN_1787689 16.12358 0.06920904 4.899683 46
ILMN_1731507 -12.49774 0.9745763 4.793826 28
ILMN_1814316 270.236 0.001412429 15.37138 46
ILMN_1745607 1606.976 0 67.86359 44
ILMN_1757454 -6.910941 0.8177966 3.115759 59
ILMN_1735045 309.5147 0.001412429 14.22413 48
ILMN_1680754 26.73273 0.02824859 6.752947 39
ILMN_1659452 1.875267 0.3813559 4.828695 41
ILMN_1767388 66.14953 0.009887005 7.812162 52
ILMN_1673870 2.066856 0.3757062 5.274453 30
ILMN_1675204 -6.71431 0.8050848 3.737673 27
ILMN_1755321 45.87201 0.009887005 6.268811 50
ILMN_1698554 164.1891 0.002824859 14.05769 33
ILMN_1805938 10.2328 0.1341808 7.4451 31
ILMN_1676336 800.5137 0 35.67786 38

Total number of rows: 22184

Table truncated, full table size 934 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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