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Sample GSM802938 Query DataSets for GSM802938
Status Public on Jun 30, 2012
Title Cardiac septum_HCM (4310479091_C)
Sample type RNA
 
Source name Cardiac septum_HCM
Organism Homo sapiens
Characteristics gender: female
disease state: HCM
Extracted molecule total RNA
Extraction protocol Cardiac tissue was put in RNAlater
Label Cy3
Label protocol Illumina TotalPrep RNA Amplification Kit was used
 
Hybridization protocol Performed according to Illumina protocol
Scan protocol Illumina Beadstation 500GX according to Illumina protocol
Description 4310479091_C
Data processing Cubic spline normalization, subtracted background.
Illumina Genomestudio was used
 
Submission date Sep 28, 2011
Last update date Jun 30, 2012
Contact name Nina Gennebäck
E-mail(s) nina.genneback@ncl.ac.uk
Organization name Umeå University
Department Public health and clinical medicin/medicin
Street address NUS 6M
City Umeå
ZIP/Postal code 901 86
Country Sweden
 
Platform ID GPL6104
Series (1)
GSE32453 Study of transcriptional expression in HCM

Data table header descriptions
ID_REF
VALUE normalized signal
4310479091_C.Detection Pval
4310479091_C.BEAD_STDERR
4310479091_C.Avg_NBEADS

Data table
ID_REF VALUE 4310479091_C.Detection Pval 4310479091_C.BEAD_STDERR 4310479091_C.Avg_NBEADS
ILMN_1809034 31.38684 0.01412429 5.443422 36
ILMN_1660305 77.73859 0.008474576 7.212785 35
ILMN_1792173 165.9646 0.001412429 9.073299 44
ILMN_1762337 -6.670253 0.7782486 5.17585 35
ILMN_1736007 1.132152 0.3700565 4.308818 46
ILMN_1787689 23.11416 0.02542373 5.149065 38
ILMN_1731507 -10.24594 0.9378531 5.353652 29
ILMN_1814316 115.9685 0.004237288 7.657526 49
ILMN_1745607 2003.797 0 83.45016 41
ILMN_1757454 -4.417006 0.6596045 3.792866 47
ILMN_1735045 287.4891 0.001412429 9.244402 59
ILMN_1680754 17.40535 0.03813559 4.858492 35
ILMN_1659452 13.69423 0.06638418 5.908998 40
ILMN_1767388 36.34906 0.01129944 7.925241 51
ILMN_1673870 -6.483186 0.7655367 5.01908 28
ILMN_1675204 -0.05175507 0.4110169 5.817878 37
ILMN_1755321 54.14354 0.008474576 7.229236 47
ILMN_1698554 119.6874 0.004237288 7.315319 47
ILMN_1805938 0.8693182 0.3799435 5.346719 39
ILMN_1676336 596.3766 0 21.43649 35

Total number of rows: 22184

Table truncated, full table size 929 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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