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Sample GSM802939 Query DataSets for GSM802939
Status Public on Jun 30, 2012
Title Cardiac septum_HCM (4158307036_B)
Sample type RNA
 
Source name Cardiac septum_HCM
Organism Homo sapiens
Characteristics gender: male
disease state: HCM
Extracted molecule total RNA
Extraction protocol Cardiac tissue was put in RNAlater
Label Cy3
Label protocol Illumina TotalPrep RNA Amplification Kit was used
 
Hybridization protocol Performed according to Illumina protocol
Scan protocol Illumina Beadstation 500GX according to Illumina protocol
Description 4158307036_B
Data processing Cubic spline normalization, subtracted background.
Illumina Genomestudio was used
 
Submission date Sep 28, 2011
Last update date Jun 30, 2012
Contact name Nina Gennebäck
E-mail(s) nina.genneback@ncl.ac.uk
Organization name Umeå University
Department Public health and clinical medicin/medicin
Street address NUS 6M
City Umeå
ZIP/Postal code 901 86
Country Sweden
 
Platform ID GPL6104
Series (1)
GSE32453 Study of transcriptional expression in HCM

Data table header descriptions
ID_REF
VALUE normalized signal
4158307036_B.Detection Pval
4158307036_B.BEAD_STDERR
4158307036_B.Avg_NBEADS

Data table
ID_REF VALUE 4158307036_B.Detection Pval 4158307036_B.BEAD_STDERR 4158307036_B.Avg_NBEADS
ILMN_1809034 19.25838 0.04237288 6.095287 41
ILMN_1660305 190.2083 0.002824859 16.12691 39
ILMN_1792173 164.9622 0.004237288 12.18028 39
ILMN_1762337 -9.541696 0.8601695 5.243582 40
ILMN_1736007 -12.36083 0.930791 3.941604 32
ILMN_1787689 19.27413 0.04237288 6.468064 44
ILMN_1731507 2.632963 0.3135593 5.728681 25
ILMN_1814316 253.6985 0.001412429 13.33138 40
ILMN_1745607 5880.3 0 310.3076 41
ILMN_1757454 6.109121 0.2274011 5.1744 43
ILMN_1735045 671.722 0 35.27911 56
ILMN_1680754 26.85796 0.02824859 7.143879 39
ILMN_1659452 -8.122669 0.819209 6.045605 33
ILMN_1767388 100.6871 0.007062147 10.66651 40
ILMN_1673870 3.056263 0.3022599 7.267095 28
ILMN_1675204 0.1183655 0.4166667 7.016962 38
ILMN_1755321 88.59071 0.01129944 8.505559 41
ILMN_1698554 213.8069 0.002824859 15.49464 39
ILMN_1805938 -0.8951502 0.4717514 6.332996 47
ILMN_1676336 617.3867 0 46.12527 34

Total number of rows: 22184

Table truncated, full table size 923 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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