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Sample GSM802940 Query DataSets for GSM802940
Status Public on Jun 30, 2012
Title Cardiac septum_heart_healthy (4158307042_E)
Sample type RNA
 
Source name Cardiac septum_heart_healthy
Organism Homo sapiens
Characteristics gender: male
disease state: control
Extracted molecule total RNA
Extraction protocol Cardiac tissue was put in RNAlater
Label Cy3
Label protocol Illumina TotalPrep RNA Amplification Kit was used
 
Hybridization protocol Performed according to Illumina protocol
Scan protocol Illumina Beadstation 500GX according to Illumina protocol
Description 4158307042_E
Data processing Cubic spline normalization, subtracted background.
Illumina Genomestudio was used
 
Submission date Sep 28, 2011
Last update date Jun 30, 2012
Contact name Nina Gennebäck
E-mail(s) nina.genneback@ncl.ac.uk
Organization name Umeå University
Department Public health and clinical medicin/medicin
Street address NUS 6M
City Umeå
ZIP/Postal code 901 86
Country Sweden
 
Platform ID GPL6104
Series (1)
GSE32453 Study of transcriptional expression in HCM

Data table header descriptions
ID_REF
VALUE normalized signal
4158307042_E.Detection Pval
4158307042_E.BEAD_STDERR
4158307042_E.Avg_NBEADS

Data table
ID_REF VALUE 4158307042_E.Detection Pval 4158307042_E.BEAD_STDERR 4158307042_E.Avg_NBEADS
ILMN_1809034 2.573572 0.3375706 4.13001 39
ILMN_1660305 207.526 0.004237288 17.77662 43
ILMN_1792173 165.5073 0.005649718 19.85794 40
ILMN_1762337 -5.768932 0.7189265 3.144792 55
ILMN_1736007 10.92853 0.1836158 4.363272 44
ILMN_1787689 16.60119 0.1186441 5.646224 39
ILMN_1731507 34.91421 0.03531073 4.157132 41
ILMN_1814316 402.916 0 25.22093 41
ILMN_1745607 6948.661 0 386.21 37
ILMN_1757454 -5.398444 0.6963277 4.022204 45
ILMN_1735045 869.1888 0 39.95874 50
ILMN_1680754 20.17396 0.08757062 5.354488 33
ILMN_1659452 9.410171 0.200565 3.313179 44
ILMN_1767388 151.5922 0.007062147 13.84974 40
ILMN_1673870 13.10548 0.1539548 5.104349 33
ILMN_1675204 -3.456347 0.5903955 4.081783 35
ILMN_1755321 77.24572 0.01412429 12.01946 55
ILMN_1698554 335.8774 0.001412429 27.50433 44
ILMN_1805938 7.120744 0.2330509 4.080577 44
ILMN_1676336 589.5836 0 32.79999 34

Total number of rows: 22184

Table truncated, full table size 928 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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