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Sample GSM802942 Query DataSets for GSM802942
Status Public on Jun 30, 2012
Title Cardiac septum_heart_healthy (4158307036_F)
Sample type RNA
 
Source name Cardiac septum_heart_healthy
Organism Homo sapiens
Characteristics gender: male
disease state: control
Extracted molecule total RNA
Extraction protocol Cardiac tissue was put in RNAlater
Label Cy3
Label protocol Illumina TotalPrep RNA Amplification Kit was used
 
Hybridization protocol Performed according to Illumina protocol
Scan protocol Illumina Beadstation 500GX according to Illumina protocol
Description 4158307036_F
Data processing Cubic spline normalization, subtracted background.
Illumina Genomestudio was used
 
Submission date Sep 28, 2011
Last update date Jun 30, 2012
Contact name Nina Gennebäck
E-mail(s) nina.genneback@ncl.ac.uk
Organization name Umeå University
Department Public health and clinical medicin/medicin
Street address NUS 6M
City Umeå
ZIP/Postal code 901 86
Country Sweden
 
Platform ID GPL6104
Series (1)
GSE32453 Study of transcriptional expression in HCM

Data table header descriptions
ID_REF
VALUE normalized signal
4158307036_F.Detection Pval
4158307036_F.BEAD_STDERR
4158307036_F.Avg_NBEADS

Data table
ID_REF VALUE 4158307036_F.Detection Pval 4158307036_F.BEAD_STDERR 4158307036_F.Avg_NBEADS
ILMN_1809034 19.52456 0.06497175 7.684436 41
ILMN_1660305 203.32 0.004237288 22.0606 35
ILMN_1792173 88.63112 0.01271186 10.29186 36
ILMN_1762337 -4.290542 0.6144068 4.721507 34
ILMN_1736007 -10.95115 0.9350283 4.321599 29
ILMN_1787689 35.79867 0.03107345 7.45348 50
ILMN_1731507 29.57198 0.03389831 6.742899 46
ILMN_1814316 265.778 0.002824859 18.54914 41
ILMN_1745607 6732.414 0 478.7991 32
ILMN_1757454 -0.3871921 0.450565 5.077805 34
ILMN_1735045 452.0967 0 19.88073 61
ILMN_1680754 27.87965 0.03813559 9.079145 31
ILMN_1659452 -0.01116258 0.430791 6.8985 34
ILMN_1767388 158.2502 0.005649718 10.8643 52
ILMN_1673870 8.133124 0.2118644 6.657949 38
ILMN_1675204 -0.04024643 0.4336158 6.256328 36
ILMN_1755321 122.4603 0.009887005 15.292 43
ILMN_1698554 260.7057 0.002824859 24.79299 36
ILMN_1805938 -4.028883 0.6031073 4.894656 51
ILMN_1676336 1160.798 0 87.29954 30

Total number of rows: 22184

Table truncated, full table size 930 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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