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Sample GSM802944 Query DataSets for GSM802944
Status Public on Jun 30, 2012
Title Cardiac septum_heart_healthy (4158307036_H)
Sample type RNA
 
Source name Cardiac septum_heart_healthy
Organism Homo sapiens
Characteristics gender: male
disease state: control
Extracted molecule total RNA
Extraction protocol Cardiac tissue was put in RNAlater
Label Cy3
Label protocol Illumina TotalPrep RNA Amplification Kit was used
 
Hybridization protocol Performed according to Illumina protocol
Scan protocol Illumina Beadstation 500GX according to Illumina protocol
Description 4158307036_H
Data processing Cubic spline normalization, subtracted background.
Illumina Genomestudio was used
 
Submission date Sep 28, 2011
Last update date Jun 30, 2012
Contact name Nina Gennebäck
E-mail(s) nina.genneback@ncl.ac.uk
Organization name Umeå University
Department Public health and clinical medicin/medicin
Street address NUS 6M
City Umeå
ZIP/Postal code 901 86
Country Sweden
 
Platform ID GPL6104
Series (1)
GSE32453 Study of transcriptional expression in HCM

Data table header descriptions
ID_REF
VALUE normalized signal
4158307036_H.Detection Pval
4158307036_H.BEAD_STDERR
4158307036_H.Avg_NBEADS

Data table
ID_REF VALUE 4158307036_H.Detection Pval 4158307036_H.BEAD_STDERR 4158307036_H.Avg_NBEADS
ILMN_1809034 14.41869 0.1045198 4.557858 47
ILMN_1660305 155.112 0.002824859 16.94946 32
ILMN_1792173 148.0178 0.002824859 17.45861 42
ILMN_1762337 -5.384994 0.7274011 4.353249 44
ILMN_1736007 2.824184 0.3333333 3.95839 52
ILMN_1787689 27.48949 0.03107345 5.694767 44
ILMN_1731507 35.10406 0.02118644 7.226226 29
ILMN_1814316 212.6101 0.001412429 14.0822 33
ILMN_1745607 6876.228 0 338.7233 48
ILMN_1757454 -1.428325 0.5282486 2.997838 42
ILMN_1735045 743.2516 0 36.1658 50
ILMN_1680754 20.2417 0.06214689 5.483921 28
ILMN_1659452 9.598695 0.1765537 4.907038 41
ILMN_1767388 66.24227 0.01271186 6.983114 38
ILMN_1673870 10.76992 0.1581921 5.863934 38
ILMN_1675204 3.126529 0.3276836 4.284991 48
ILMN_1755321 75.85095 0.01129944 8.303412 35
ILMN_1698554 248.9197 0 14.9613 57
ILMN_1805938 -7.349037 0.8022599 4.053162 43
ILMN_1676336 835.9863 0 55.74495 41

Total number of rows: 22184

Table truncated, full table size 913 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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