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Sample GSM811142 Query DataSets for GSM811142
Status Public on Oct 07, 2011
Title ControlLacW8 LAC1
Sample type RNA
 
Source name Lacrimal gland
Organism Mus musculus
Characteristics tissue: Lacrimal gland
strain: NOD
time: Week 8
treatment: None
Treatment protocol Mice were treated either with mLTBD-mIgG1 or MOPC21
Extracted molecule total RNA
Extraction protocol The RNA was extracted with Trizol reagent (Life Technologies) and cleaned up with RNA easy (Qiagen) according to the manufacturer’s protocols.
Label biotin
Label protocol NuGEN Ovation
 
Hybridization protocol standard Affymetrix protcol
Scan protocol HTAPS scanner was used
Data processing data was normalized using the gcrma using R package
 
Submission date Oct 06, 2011
Last update date Oct 07, 2011
Contact name Jadwiga Bienkowska
E-mail(s) jbienkowska@gmail.com
Phone 6174602469
Organization name BiogenIdec
Street address 45 Fayette Str Apt 3
City Cambridge
State/province MA
ZIP/Postal code 02139
Country USA
 
Platform ID GPL1261
Series (1)
GSE32681 Alterations in gene expression in lacrimal and salivary glands of male NOD mice due to LTBR-Ig treatment relative to control antibody

Data table header descriptions
ID_REF
VALUE values represent gcrma normalization values

Data table
ID_REF VALUE
1415670_at 9.186172159
1415671_at 10.66677496
1415672_at 8.279524555
1415673_at 7.118873795
1415674_a_at 7.193069637
1415675_at 7.761700146
1415676_a_at 9.992779126
1415677_at 10.00012309
1415678_at 8.532743457
1415679_at 10.6315879
1415680_at 7.052341994
1415681_at 8.735489284
1415682_at 6.561127425
1415683_at 10.42007162
1415684_at 8.138749972
1415685_at 6.82979974
1415686_at 8.332355528
1415687_a_at 9.668032273
1415688_at 9.503486639
1415689_s_at 6.963738315

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.




Supplementary file Size Download File type/resource
GSM811142.CEL.gz 3.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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