|
Status |
Public on Oct 25, 2011 |
Title |
UT-A_ChipSeq_ProgFib_Input |
Sample type |
SRA |
|
|
Source name |
ProgFib
|
Organism |
Homo sapiens |
Characteristics |
datatype: ChipSeq datatype description: Chromatin IP Sequencing treatment: None treatment description: No special treatment or protocol applies controlid: wgEncodeEH000593 labversion: privacy-noSequence fseq v 1.84 cell description: fibroblasts, Hutchinson-Gilford progeria syndrome (cell line HGPS, HGADFN167, progeria research foundation) cell karyotype: unknown cell sex: M antibody: Input antibody description: Control signal which may be subtracted from experimental raw signal before peaks are called. controlid: ProgFib/Input labversion: align_on_cluster_bwa.pl v 1
|
Biomaterial provider |
Progeria Research Foundation
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
|
|
|
Library strategy |
ChIP-Seq |
Library source |
genomic |
Library selection |
ChIP |
Instrument model |
Illumina Genome Analyzer |
|
|
Data processing |
http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromChip
|
|
|
Submission date |
Oct 25, 2011 |
Last update date |
Aug 26, 2014 |
Contact name |
ENCODE DCC |
E-mail(s) |
encode-help@lists.stanford.edu
|
Organization name |
ENCODE DCC
|
Street address |
300 Pasteur Dr
|
City |
Stanford |
State/province |
CA |
ZIP/Postal code |
94305-5120 |
Country |
USA |
|
|
Platform ID |
GPL9052 |
Series (1) |
GSE33213 |
Open Chromatin TFBS by ChIP-seq from ENCODE/Open Chrom(UT Austin) |
|
Relations |
BioSample |
SAMN02197954 |
Named Annotation |
GSM822269_hg19_wgEncodeOpenChromChipProgfibInputSig.bigWig |