|
| Status |
Public on May 07, 2024 |
| Title |
pooled clone sequencing from DNA cloning sample (ENCLB391EDL) |
| Sample type |
SRA |
| |
|
| Source name |
control
|
| Organism |
synthetic construct |
| Characteristics |
cell_type: DNA cloning sample
biomaterial_type: cloning host
biosample encode accession: (SAMN41212000)
biosample term name: synthetic construct
age: 60 days
lab: Ryan Tewhey, JAX
Sex: not applicable
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
general protocol: https://www.encodeproject.org/documents/af9db6cf-b70f-4de9-8d78-accc77bfaf38/@@download/attachment/ENCODE%20MPRA%20Protocol%20-%20Tewhey%20Lab.pdf
|
| |
|
| Library strategy |
OTHER |
| Library source |
genomic |
| Library selection |
other |
| Instrument model |
Illumina NovaSeq 6000 |
| |
|
| Description |
https://www.encodeproject.org/experiments/ENCSR205HWY/
***************
biological replicate number: 3
technical replicate number: 1
description:
experiment encode accession: ENCSR205HWY
assay title: pooled clone sequencing
encode release date: 2023-02-12
lab: Ryan Tewhey, JAX
library encode accession: ENCLB391EDL
|
| Data processing |
See GSM*_README.txt supplementary file linked below
|
| |
|
| Submission date |
May 06, 2024 |
| Last update date |
May 08, 2024 |
| Contact name |
ENCODE DCC |
| E-mail(s) |
encode-help@lists.stanford.edu
|
| Organization name |
ENCODE DCC
|
| Street address |
300 Pasteur Dr
|
| City |
Stanford |
| State/province |
CA |
| ZIP/Postal code |
94305-5120 |
| Country |
USA |
| |
|
| Platform ID |
GPL26526 |
| Series (1) |
| GSE266801 |
pooled clone sequencing from DNA cloning sample (ENCSR205HWY) |
|
| Relations |
| BioSample |
SAMN41212000 |
| SRA |
SRX24485076 |
