|
| Status |
Public on Jul 10, 2024 |
| Title |
Plasma from unaffected, 648p |
| Sample type |
SRA |
| |
|
| Source name |
sodium heparin plasma
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: sodium heparin plasma
genotype: unaffected
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA and miRNA from tissue and cells was isolated using the RNeasy Mini Kit (Qiagen)
Library miR preparation was performed using CleanTag™ Small RNA Library Preparation Kit
|
| |
|
| Library strategy |
miRNA-Seq |
| Library source |
transcriptomic |
| Library selection |
size fractionation |
| Instrument model |
Illumina HiSeq 2000 |
| |
|
| Data processing |
miND pipeline by TAmiRNA (Diendorfer et al.)
Assembly: GRCh38
Supplementary files format and content: raw miRNA reads CSV quantified with miND pipeline
|
| |
|
| Submission date |
Jul 09, 2024 |
| Last update date |
Jul 10, 2024 |
| Contact name |
Andreas B Diendorfer |
| E-mail(s) |
service@tamirna.com
|
| Organization name |
TAmiRNA GmbH
|
| Street address |
Leberstraße 20
|
| City |
Wien |
| ZIP/Postal code |
1110 |
| Country |
Austria |
| |
|
| Platform ID |
GPL11154 |
| Series (1) |
| GSE271848 |
Aged vascular niche hinders osteogenesis of mesenchymal stem cells through paracrine repression of Wnt-axis |
|
| Relations |
| BioSample |
SAMN42390388 |
| SRA |
SRX25261124 |
