GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM85
Query DataSets for GSM85
Status
Public on Jul 19, 2001
Title
Renal cell carcinoma: rccc-2, normal 1 (part 1 of 2)
Sample type
RNA
Source name
normal kidney tissue (as reference)
Organism
Homo sapiens
Extracted molecule
total RNA
Description
sex=m
age=48
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180165 reuse=3 date=16-Jan-1999
Submission date
Jul 19, 2001
Last update date
May 27, 2005
Contact name
Wolfgang Huber
E-mail(s)
w.huber@dkfz.de
Phone
+49-6221-424709
Fax
+49-6221-423470
URL
http://www.dkfz-heidelberg.de/abt0840
Organization name
German Cancer Research Center
Department
Molecular Genome Analysis
Street address
Im Neuenheimer Feld 280
City
Heidelberg
ZIP/Postal code
69120
Country
Germany
Platform ID
GPL9
Series (1)
GSE3
Renal Cell Carcinoma Differential Expression
Data table header descriptions
ID_REF
SIGNAL_RAW
Mean spot intensity
BKD_RAW
33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE
SIGNAL_RAW-SIGNAL_BKD
Data table
ID_REF
SIGNAL_RAW
BKD_RAW
VALUE
1
12251
17424
-5173
2
11057
17424
-6367
3
17979
17424
555
4
13841
17424
-3583
5
38276
17424
20852
6
920056
17424
902632
7
19404
17424
1980
8
84941
17424
67517
9
69154
17424
51730
10
3391
17424
-14033
11
62633
17424
45209
12
14148
17424
-3276
13
12134
17424
-5290
14
11864
17424
-5560
15
10108
17424
-7316
16
20465
17424
3041
17
16126
20164
-4038
18
17332
20164
-2832
19
25988
20164
5824
20
14471
20164
-5693
Total number of rows:
36864
Table truncated, full table size
866 Kbytes
.
Supplementary data files not provided
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|