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Sample GSM8505875 Query DataSets for GSM8505875
Status Public on Sep 11, 2024
Title Cerebellar Control stage 41 sample 4
Sample type SRA
 
Source name Hindbrain Rh_1 dissected
Organism Xenopus laevis
Characteristics tissue: Hindbrain Rh_1 dissected
cell line: stage 41
cell type: cerebellar primordium
genotype: Xenla9.2
treatment: Injected Morpholino (MO) Control (Ct)
Treatment protocol Dissected rhombomere 1 stage 41
Growth protocol Xenopus tadpole grown in 0.3X MMR
Extracted molecule total RNA
Extraction protocol Trizol (ambion) RNA extraction
Stranded mRNA prep Ligation-Illumina
 
Library strategy RNA-Seq
Library source transcriptomic
Library selection cDNA
Instrument model Illumina NovaSeq X
 
Data processing feature Counts V2.0.1
Assembly: X. laevis v10.1
Supplementary files format and content: tab-delimated text file includes raw counts for each sample
 
Submission date Sep 10, 2024
Last update date Sep 11, 2024
Contact name Mohamed Doulazmi
E-mail(s) mohamed.doulazmi@upmc.fr
Phone 33144273508
Organization name Sorbonne Unversity
Department Neurocsiences
Street address 9 quai St Bernard
City Paris
State/province Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL34884
Series (1)
GSE276791 Role of barhl1 in amphbian cerebellum
Relations
BioSample SAMEA114093857
SRA ERX11139199

Supplementary file Size Download File type/resource
GSM8505875_D698T123.txt.gz 166.8 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA

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