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Sample GSM855954 Query DataSets for GSM855954
Status Public on Mar 01, 2012
Title Pediatric_GBM_35
Sample type RNA
 
Source name Primary brain tumor tissue
Organism Homo sapiens
Characteristics disease state: paediatric glioblastoma
age: 7.3
gender: M
h3.3_status: wt
Extracted molecule total RNA
Extraction protocol Trizol
Label biotin
Label protocol Affymetrix protocol
 
Hybridization protocol Affymetrix protocol
Scan protocol Affymetrix protocol
Description Gene expression data from a primary pediatric glioblastoma
Data processing Normalization according to MAS5.0 algorithm. Only probesets called present in at least one sample were included
 
Submission date Jan 03, 2012
Last update date Mar 01, 2012
Contact name Marcel Kool
E-mail(s) m.kool@dkfz.de
Phone 00496221424636
Organization name German Cancer Research Center
Department Pediatric Neuro Oncology
Street address Im Neuenheimer Feld 580
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL570
Series (1)
GSE34824 Frequent driver mutations in histone H3.3 and chromatin remodeling genes in paediatric glioblastoma

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity

Data table
ID_REF VALUE
1552829_at 45.4
1552867_at 54.6
1552972_at 2.3
1552976_at 30.2
1553269_at 73.2
1553275_s_at 41.1
1553538_s_at 7271
1553547_at 12.1
1553569_at 7495.8
1553570_x_at 7532.4
1553575_at 217
1553979_at 1049.1
1554007_at 527.2
1554043_a_at 20.6
1554103_at 12.8
1554108_at 27.2
1554220_a_at 7.9
1554224_at 12.1
1554225_a_at 41.5
1554266_at 27.3

Total number of rows: 40777

Table truncated, full table size 632 Kbytes.




Supplementary file Size Download File type/resource
GSM855954.CEL.gz 4.8 Mb (ftp)(http) CEL
Processed data included within Sample table
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