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Sample GSM856098 Query DataSets for GSM856098
Status Public on Jan 22, 2013
Title Blood 5
Sample type RNA
 
Source name Human blood
Organism Homo sapiens
Characteristics physiological specimen: Blood
ethnic group: Korean
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN RNeasy mini kit or QIAGEN RNeasy Protect Saliva mini kit (saliva) in accordance with the prescribed protocol provided with the kit. Quality control was performed with Experion (BIO-RAD).
Label biotin
Label protocol Illumina TotalPrep RNA Amplification kit (Ambion)
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 5
Data processing The data were normalised using quantile normalisation with IlluminaGUI in R
 
Submission date Jan 04, 2012
Last update date Jan 22, 2013
Contact name Seon-Young Kim
E-mail(s) kimsy@kribb.re.kr
Phone 82-42-879-8116
Organization name Korea Research Institute of Bioscience and Biotechnology
Department Genome Research Center
Lab Human Genomics
Street address 52 Eoeun-dong, Yuseong-gu
City Daejon
ZIP/Postal code 305333
Country South Korea
 
Platform ID GPL14951
Series (1)
GSE34844 Genome-wide mRNA profiling for identification of specific body fluid markers

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 319.5776 0.2724138
ILMN_2055271 248.0654 0.8448276
ILMN_2383229 280.4328 0.5620689
ILMN_1806310 277.7595 0.5827586
ILMN_1779670 302.5355 0.3965517
ILMN_1717783 383.524 0.02068966
ILMN_1814316 289.1627 0.4793103
ILMN_2359168 329.1588 0.2
ILMN_1731507 229.404 0.9034483
ILMN_1787689 313.623 0.3275862
ILMN_3241953 337.1107 0.162069
ILMN_1745607 308.6334 0.3482759
ILMN_2136495 270.2281 0.6551724
ILMN_1668111 293.2524 0.4551724
ILMN_2295559 206.4635 0.9724138
ILMN_1735045 303.321 0.3896552
ILMN_1680754 188.8656 0.9827586
ILMN_2375184 271.8055 0.6310345
ILMN_1659452 323.9501 0.2344828
ILMN_1767388 277.3252 0.5827586

Total number of rows: 29377

Table truncated, full table size 844 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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