|
| Status |
Public on Oct 21, 2024 |
| Title |
human GBM ZH-05, 2485 |
| Sample type |
RNA |
| |
|
| Source name |
Surgical resection GBM_TuBa2485
|
| Organism |
Homo sapiens |
| Characteristics |
name_in_pmid_21471286: ZH-05
alternative_name: 2485
treatment_gefitinib: T1
type: human
egfr_amplification: A0
disease: GBM
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Qiagen Rneasy Lipid Tissue mini kit protocol
|
| Label |
biotin
|
| Label protocol |
Affymetrix Small sample target labelling assay (double amplification) with ENZO kit, start with 100ng
|
| |
|
| Hybridization protocol |
Affymetrix hybridisation protocol
|
| Scan protocol |
GeneChip Operating Software instructions using GeneChip Scanner 3000 High-Resolution Scanning Patch
|
| Description |
Resected glioblastoma tissues treated by gefitinib
|
| Data processing |
RMA: background substruction, quantile normalization and median polish summarization
|
| |
|
| Submission date |
Oct 14, 2024 |
| Last update date |
Oct 21, 2024 |
| Contact name |
Pierre Bady |
| E-mail(s) |
pierre.bady@unil.ch
|
| Phone |
0041 21 692 40 95
|
| Organization name |
CHUV / BCF / SIB
|
| Department |
Swiss Institute of Bioinformatics
|
| Lab |
Bioinformatics Core Facility
|
| Street address |
Quartier UNIL-Sorge
|
| City |
Lausanne |
| ZIP/Postal code |
1015 |
| Country |
Switzerland |
| |
|
| Platform ID |
GPL570 |
| Series (1) |
| GSE279426 |
Expression data from glioblastoma derived xenograft and original glioblastoma tumors |
|
