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Sample GSM864615 Query DataSets for GSM864615
Status Public on Mar 19, 2013
Title Pax6 mutant (Small-eye; Sey) rostral cerebral cortex at embryonic day E14, biological replicate 2
Sample type RNA
 
Source name Rostral cerebral cortex from Sey mice
Organism Mus musculus
Characteristics strain: C57BL/6J x DBA/2J (B6D2F1)
age: Embryonic day E14
gender: nd
genotype: Pax6 Sey mutant
Treatment protocol No treatment
Growth protocol Animals housed under spf conditions
Extracted molecule total RNA
Extraction protocol RNeasy Micro Kit (Qiagen) including DNase treatment
Label biotin
Label protocol MessageAmp Premier RNA Amplification Kit (Ambion AM1792)
 
Hybridization protocol According to the Affymetrix expression protocol
Scan protocol According to the Affymetrix expression protocol
Description Gene expression data from embryonic rostral cerebral cortex from Sey mice
Data processing RMA analysis with CARMAweb standard settings (University Graz)
 
Submission date Jan 23, 2012
Last update date Dec 18, 2013
Contact name Johannes Beckers
E-mail(s) johannes.beckers@helmholtz-munich.de
Organization name Helmholtz Zentrum Muenchen
Department Institute of Experimental Genetics
Street address Ingolstaedter Landstr. 1
City Neuherberg
ZIP/Postal code 85764
Country Germany
 
Platform ID GPL1261
Series (1)
GSE35260 Functional dissection of the Paired domain of Pax6 – distinct roles of subdomains in neurogenesis and proliferation

Data table header descriptions
ID_REF
VALUE RMA signal intensity (log2)

Data table
ID_REF VALUE
1415670_at 9.612
1415671_at 11.373
1415672_at 12.053
1415673_at 8.829
1415674_a_at 10.802
1415675_at 10.008
1415676_a_at 11.998
1415677_at 9.655
1415678_at 11.021
1415679_at 11.516
1415680_at 9.170
1415681_at 10.596
1415682_at 9.565
1415683_at 10.810
1415684_at 8.687
1415685_at 9.472
1415686_at 10.512
1415687_a_at 11.307
1415688_at 11.312
1415689_s_at 10.949

Total number of rows: 45101

Table truncated, full table size 771 Kbytes.




Supplementary file Size Download File type/resource
GSM864615_Sey_2.CEL.gz 3.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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