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Sample GSM873325 Query DataSets for GSM873325
Status Public on Feb 10, 2012
Title Fetal heart_5
Sample type RNA
 
Source name Commercial total RNAs from biopsies, Fetal heart
Organism Homo sapiens
Characteristics cell type: Commercial total RNAs from biopsies
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cell samples using TRIZol reagent according to the manufacturer's protocol.
Label Cy3
Label protocol Total RNA samples were converted to Cy3 labeled-cDNA using TotalPrep RNA amplification kit from Ambion.
 
Hybridization protocol Hybridization was performed according to the whole-genome gene expression direct hybridization protocol from Illumina.
Scan protocol Beadchips were scanned using Illumina iScan, standard protocol.
Description Replicate 5
Data processing The data were log2 transformed and normalised using quantile normalization with Partek Genomics Suite software, version 6.5 (Partek, Inc., St. Louis, MO).
 
Submission date Feb 09, 2012
Last update date Feb 10, 2012
Contact name Morgane RAVON
Organization name Hoffmann-La Roche
Street address Grenzacherstrasse 124
City Basel
ZIP/Postal code 4070
Country Switzerland
 
Platform ID GPL6884
Series (2)
GSE35671 Comparison of mRNA expression profiling of differentiating human-induced pluripotent stem cell (hiPSC)–derived cardiomyocytes, biopsies from fetal, adult and hypertensive human hearts and primary cardiomyocytes
GSE35673 Expression profiling analysis of differentiating human-induced pluripotent stem cell (hiPSC)-derived cardiomyocytes

Data table header descriptions
ID_REF
VALUE Log2 transformed and quantile normalised.
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1809034 6.92358 0.04743
ILMN_1660305 7.36165 0.00132
ILMN_1792173 7.24189 0.00395
ILMN_1762337 6.36769 0.66798
ILMN_2055271 6.78549 0.31094
ILMN_1736007 6.92421 0.04743
ILMN_1814316 7.21063 0.00395
ILMN_2359168 7.34076 0.00264
ILMN_1731507 6.38339 0.58893
ILMN_1787689 6.42519 0.41107
ILMN_1745607 9.23112 0
ILMN_2136495 6.42531 0.41107
ILMN_1668111 6.79779 0.28459
ILMN_2295559 6.36392 0.68906
ILMN_1735045 10.1037 0
ILMN_1680754 6.80501 0.27009
ILMN_2375184 6.29315 0.8946
ILMN_1659452 6.81876 0.22398
ILMN_1767388 6.89127 0.08432
ILMN_1675204 6.39821 0.52174

Total number of rows: 48803

Table truncated, full table size 1316 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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