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Sample GSM873356 Query DataSets for GSM873356
Status Public on Feb 10, 2012
Title Run3_D020
Sample type RNA
 
Source name iPSC-derived cardiomyocytes, Day 20
Organism Homo sapiens
Characteristics cell type: iPSC-derived cardiomyocytes
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cell samples using TRIZol reagent according to the manufacturer's protocol.
Label Cy3
Label protocol Samples were labeled according to microRNA expression profiling protocol from Illumina.
 
Hybridization protocol Samples were hybidized onto beadchips according to microRNA expression profiling protocol from Illumina.
Scan protocol Beadchips were scanned using Illumina iScan, standard protocol.
Description Replicate 3
Data processing The data were log2 transformed and normalised using quantile normalization with Partek Genomics Suite software, version 6.5 (Partek, Inc., St. Louis, MO).
 
Submission date Feb 09, 2012
Last update date Feb 10, 2012
Contact name Morgane RAVON
Organization name Hoffmann-La Roche
Street address Grenzacherstrasse 124
City Basel
ZIP/Postal code 4070
Country Switzerland
 
Platform ID GPL8179
Series (2)
GSE35672 miRNA expression profiling of differentiating human-induced pluripotent stem cell (hiPSC)-derived cardiomyocytes
GSE35673 Expression profiling analysis of differentiating human-induced pluripotent stem cell (hiPSC)-derived cardiomyocytes

Data table header descriptions
ID_REF
VALUE Log2 transformed and quantile normalised.
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_3167304 7.98594 0.92647
ILMN_3168038 9.70956 0
ILMN_3167890 14.1763 0
ILMN_3167526 7.95691 0.95764
ILMN_3167209 8.37234 0.002
ILMN_3168219 8.93889 0
ILMN_3167464 8.13394 0.42335
ILMN_3167213 8.05155 0.76971
ILMN_3167057 8.01499 0.86893
ILMN_3168313 8.18451 0.22931
ILMN_3166972 8.13981 0.40202
ILMN_3168149 8.36783 0.00238
ILMN_3168527 8.32416 0.01321
ILMN_3167562 8.11693 0.48843
ILMN_3168099 9.67597 0
ILMN_3168017 8.25592 0.05905
ILMN_3167545 8.06227 0.71687
ILMN_3167951 10.5512 0
ILMN_3167172 8.29498 0.02928
ILMN_3167994 8.23298 0.08953

Total number of rows: 1145

Table truncated, full table size 28 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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