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Status |
Public on Oct 02, 2012 |
Title |
DU145 parental sensitive 2 |
Sample type |
RNA |
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Source name |
DU145 parental Docetaxel-sensitive cells
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Organism |
Homo sapiens |
Characteristics |
cell line: DU145 cell type: prostate cancer cells phenotype: docetaxel sensitive
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Growth protocol |
Parental Docetaxel-sensitive and resistant cells were grown with RPMI supplemented with 10% FBS alone or under exposure to Docetaxel, respectively, before harvesting total RNA.
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Extracted molecule |
total RNA |
Extraction protocol |
Trizol extraction of total RNA was performed according to the manufacturer's instructions.
|
Label |
biotin
|
Label protocol |
Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
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|
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Hybridization protocol |
Following fragmentation, 10 ug of cRNA were hybridized on Affymetrix Human U133 Plus 2.0 or Affymetrix Human U133A 2.0 arrays.
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Scan protocol |
GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
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Description |
DU145 2 Gene expression data from DU145 parental Docetaxel-sensitive cells.
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Data processing |
The data were analyzed with Microarray Suite, MicroDB, and Data Mining tool software (Affymetrix). Quantile normalization and RMA summarization were used to obtain probeset level expression.
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Submission date |
Feb 28, 2012 |
Last update date |
Oct 02, 2012 |
Contact name |
Josep Domingo-Domenech |
E-mail(s) |
josep.domingo-domenech@mssm.edu
|
Phone |
212-241-9145
|
Organization name |
Mount Sinai School of Medicine
|
Department |
Pathology
|
Street address |
Annenberg Building, Room 24-16
|
City |
New York |
State/province |
New York |
ZIP/Postal code |
10029 |
Country |
USA |
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Platform ID |
GPL571 |
Series (1) |
GSE36135 |
Expression data from prostate cancer Docetaxel-resistant cells |
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