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Sample GSM89103 Query DataSets for GSM89103
Status Public on Dec 22, 2005
Title Colon - 95093
Sample type RNA
 
Source name Colon
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.3
Patient Age: 70-80
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 19
Diagnosis made by: Colonoscopy
Pathological T: 3
Pathological N: 1
Pathological M: 1
Pathological Metastatic Sites: Hepatic
Pathological Stage: 4
Pathological Grade: 1
Pathological Multiple Tumors: No
Pathological Stage During or Following Multimodality Therapy: No
Primary Site: Colon
Histology: Adenocarcinoma
 
Submission date Dec 22, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2646.4 P 0.000195
AFFX-BioB-M_at 4112.8 P 4.4e-005
AFFX-BioB-3_at 2264.3 P 4.4e-005
AFFX-BioC-5_at 5913.8 P 4.4e-005
AFFX-BioC-3_at 6448 P 4.4e-005
AFFX-BioDn-5_at 15943.1 P 4.4e-005
AFFX-BioDn-3_at 22408.8 P 4.4e-005
AFFX-CreX-5_at 68826.8 P 4.4e-005
AFFX-CreX-3_at 75798.3 P 4.4e-005
AFFX-DapX-5_at 3724.9 P 6e-005
AFFX-DapX-M_at 5817.1 P 9.5e-005
AFFX-DapX-3_at 10090.6 P 5.2e-005
AFFX-LysX-5_at 312.3 P 0.00011
AFFX-LysX-M_at 723.1 P 0.000147
AFFX-LysX-3_at 1438.4 P 9.5e-005
AFFX-PheX-5_at 589.4 P 6e-005
AFFX-PheX-M_at 673.7 P 7e-005
AFFX-PheX-3_at 1245.4 P 9.5e-005
AFFX-ThrX-5_at 837.4 P 0.000127
AFFX-ThrX-M_at 1736.7 P 5.2e-005

Total number of rows: 54675

Table truncated, full table size 1456 Kbytes.




Supplementary file Size Download File type/resource
GSM89103.CEL.gz 7.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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