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Sample GSM91138 Query DataSets for GSM91138
Status Public on Jan 06, 2007
Title larvae_wt_control_3
Sample type RNA
 
Source name Larvae
Organism Drosophila melanogaster
Characteristics Gender: male
Stage: third instar larvae
Genotype: y+ w roX1+ roX2-/ Y
Extracted molecule total RNA
Extraction protocol TRIzol standard protocol
Label Biotin
Label protocol Affymetrix GeneChip® Expression Analysis Technical Manual
 
Hybridization protocol Affymetrix GeneChip® Expression Analysis Technical Manual
Scan protocol Affymetrix GeneChip® Expression Analysis Technical Manual
Description Total RNA was prepared from roX1+ roX2- male third instar larvae. roX1+ roX2- male was used for the wildtype control.
Data processing The Chip Image was analysed using GCOS 1.2 from Affymetrix.
 
Submission date Jan 06, 2006
Last update date Aug 28, 2018
Contact name Xinxian Deng
E-mail(s) av4849@wayne.edu
Phone 313-577-3450
Fax 313-577-6891
Organization name Wayne State University
Department Biological Sciences
Street address 5047 Gullen Mall
City Detroit
State/province MI
ZIP/Postal code 48202
Country USA
 
Platform ID GPL1322
Series (1)
GSE3990 roX RNAs are required for up-regulation of male X chromosome in Drosophila.
Relations
Reanalyzed by GSE119084

Data table header descriptions
ID_REF
VALUE Probeset intensity from array_wildtype control_replicate3
ABS_CALL Probesets are sorted in Affymetrix PM-MM (Perfect match- Mismatch) mode. Present call means specific-binding. Absent call means non-specific-binding.

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 190.064 P
AFFX-BioB-M_at 238.208 P
AFFX-BioB-3_at 252.244 P
AFFX-BioC-5_at 438.81 P
AFFX-BioC-3_at 454.12 P
AFFX-BioDn-5_at 1249.96 P
AFFX-BioDn-3_at 2259.92 P
AFFX-CreX-5_at 5359.86 P
AFFX-CreX-3_at 5593.77 P
AFFX-DapX-5_at 8.9461 A
AFFX-DapX-M_at 11.2113 A
AFFX-DapX-3_at 3.00671 A
AFFX-LysX-5_at -1.22688 A
AFFX-LysX-M_at 136.748 A
AFFX-LysX-3_at 14.7445 A
AFFX-PheX-5_at 10.612 A
AFFX-PheX-M_at 40.3101 A
AFFX-PheX-3_at 39.3697 P
AFFX-ThrX-5_at 14.0501 A
AFFX-ThrX-M_at 3.67073 A

Total number of rows: 18952

Table truncated, full table size 395 Kbytes.




Supplementary file Size Download File type/resource
GSM91138.cel.gz 3.2 Mb (ftp)(http) CEL

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