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Sample GSM92 Query DataSets for GSM92
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rccc-3, tumor 2 (part 1 of 2)
Sample type RNA
 
Source name renal clear cell carcinoma (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=TRUE
survival.months=21
died=FALSE
tumorsize.cm=3.5
sex=m
age=50
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage2 filter=180163 reuse=4 date=19-Apr-1999
 
Submission date Jul 19, 2001
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL9
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 12609 8836 3773
2 7300 8836 -1536
3 5899 8836 -2937
4 4815 8836 -4021
5 9299 8836 463
6 43944 8836 35108
7 6159 8836 -2677
8 26697 8836 17861
9 24844 8836 16008
10 4995 8836 -3841
11 9669 8836 833
12 15190 8836 6354
13 11380 8836 2544
14 5972 8836 -2864
15 14889 8836 6053
16 9908 8836 1072
17 14500 8464 6036
18 6157 8464 -2307
19 10015 8464 1551
20 2618 8464 -5846

Total number of rows: 36864

Table truncated, full table size 836 Kbytes.




Supplementary data files not provided

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