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Sample GSM926234 Query DataSets for GSM926234
Status Public on May 06, 2012
Title High_651
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.6938313039793 7667.3 1629.355 0 49
ILMN_2721178 10.9992366159235 2056.4 532.129578808583 0 43
ILMN_3033922 11.2935673634332 2612.1 643.625562798744 0 32
ILMN_3092673 12.7030527335989 7724 1748.79332403575 0 52
ILMN_2816356 8.90061767412379 265.2 65.4081780819493 0.57519 35
ILMN_2808939 10.8772625227901 1845.1 532.469256270256 0 33
ILMN_2634564 10.1818345806683 969.2 415.880981996051 0 34
ILMN_2737647 9.10978948156875 326.2 99.2660425321771 0.01504 33
ILMN_2734484 9.33139278006767 412.2 108.454093366733 0 48
ILMN_2952292 9.2264339216544 367.1 94.258395100914 0 47
ILMN_2699078 8.88763072549942 261.6 62.7142905564593 0.65163 40
ILMN_1213681 10.0699673477333 877.7 266.218019673725 0 39
ILMN_2735413 8.85408809669715 252.5 82.4846455044816 0.81078 34
ILMN_2735415 8.90061767412379 265.2 76.544227411347 0.57519 30
ILMN_2891688 10.167564567625 957.4 355.989865900702 0 39
ILMN_2637698 10.7374208450345 1596.5 616.219481392791 0 38
ILMN_2674228 10.2542682926566 1036.7 321.186217387982 0 40
ILMN_2601546 8.91248290299874 268.7 70.068 0.51378 36
ILMN_1230831 9.0590819662119 311 77.0277635142031 0.04637 27
ILMN_2848071 9.03863524465719 304.9 93.9543500429863 0.06266 37

Total number of rows: 25697

Table truncated, full table size 1515 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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