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Sample GSM926241 Query DataSets for GSM926241
Status Public on May 06, 2012
Title High_680
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.3381942827819 8371.3 1663.93306921643 0 52
ILMN_2721178 10.4932950055684 2044.5 523.170496861205 0 34
ILMN_3033922 10.9712552385374 2983.7 858.710174063403 0 40
ILMN_3092673 12.7495667000215 11166.5 2788.91456971615 0 47
ILMN_2816356 9.03018661517137 445.1 136.076924370005 0.04762 34
ILMN_2808939 10.6218862010901 2271.5 540.032532797794 0 30
ILMN_2634564 10.1171402824143 1468.6 459.408409696645 0 29
ILMN_2737647 9.11402251092677 498.6 210.186076494139 0.00376 32
ILMN_2734484 11.1643522059233 3480.2 1096.73666992127 0 46
ILMN_2952292 9.1627120703161 532.2 158.743728616283 0.00251 55
ILMN_2699078 8.96223158345323 408.1 116.24532678779 0.24561 40
ILMN_1213681 9.82949798231669 1117.4 306.846664280386 0 45
ILMN_2735413 8.88272428059049 371.4 122.94 0.65915 36
ILMN_2735415 8.97672155772142 415.9 138.581829285083 0.18045 33
ILMN_2891688 10.8227177913862 2668.4 680.604419027676 0 32
ILMN_2637698 11.3714526271103 4135.2 788.429493603582 0 41
ILMN_2674228 9.97608538418521 1288.5 386.697067762351 0 34
ILMN_2601546 9.00890972689635 432.8 140.794578528436 0.08521 47
ILMN_1230831 9.17590366165689 542.1 217.97323265025 0.00125 42
ILMN_2848071 9.07124490970183 470.4 132.750914252972 0.0213 35

Total number of rows: 25697

Table truncated, full table size 1520 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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