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Sample GSM926244 Query DataSets for GSM926244
Status Public on May 06, 2012
Title High_720
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.2788767350786 5093.5 1483.63252319097 0 30
ILMN_2721178 10.3688759155168 1209 302.681811617414 0 44
ILMN_3033922 11.1119121117023 2127.7 553.527447490186 0 45
ILMN_3092673 12.6902068376635 6815.3 1446.55038780023 0 45
ILMN_2816356 8.91590653694799 356.1 139.289179181299 0.51754 37
ILMN_2808939 10.7723779058353 1650.4 430.275817189393 0 42
ILMN_2634564 10.1076984398622 985.5 330.245231797523 0 29
ILMN_2737647 8.91831732141748 357 112.726779560138 0.51128 30
ILMN_2734484 11.3578093646975 2556 642.865043168471 0 43
ILMN_2952292 9.15426901221194 444.7 149.944897539063 0.00877 42
ILMN_2699078 8.86178982779373 333.9 104.869352076763 0.77068 45
ILMN_1213681 9.81548065481821 776.8 257.74817895768 0 44
ILMN_2735413 8.80544869792739 310.4 116.411909304847 0.90351 37
ILMN_2735415 8.79715840206086 306.9 105.946968890101 0.92231 33
ILMN_2891688 10.9807106798415 1927.3 478.812824226754 0 41
ILMN_2637698 11.3052096821883 2451.3 628.442565993107 0 32
ILMN_2674228 9.96909947421479 879.7 246.055137723235 0 48
ILMN_2601546 9.00285669939379 390.2 127.159644231179 0.15539 41
ILMN_1230831 8.85975348511933 333 118.228043086232 0.77193 28
ILMN_2848071 9.06976751067236 414.5 154.842802971271 0.04135 37

Total number of rows: 25697

Table truncated, full table size 1522 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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