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Sample GSM926258 Query DataSets for GSM926258
Status Public on May 06, 2012
Title High_819
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.0219156826231 1669.9 349.373337192465 0 29
ILMN_2721178 10.3619296879756 606.2 183.861575148262 0 34
ILMN_3033922 10.9748071902206 863.4 212.055152033616 0 39
ILMN_3092673 12.5434347909741 2317.6 505.6637569245 0 43
ILMN_2816356 8.90866836821342 289.9 92.555 0.57644 25
ILMN_2808939 10.5818772581905 686.7 189.550951398298 0 26
ILMN_2634564 10.3533944606416 602 132.862332415926 0 39
ILMN_2737647 8.83843074376002 271.7 79.8965367584853 0.84712 26
ILMN_2734484 11.2051942510603 990.9 277.850364333035 0 40
ILMN_2952292 9.41467086558208 374.1 124.712259694065 0.00251 38
ILMN_2699078 8.8898922887316 285.1 82.9212448049353 0.66416 40
ILMN_1213681 9.72907876678364 435.6 120.564426266623 0 41
ILMN_2735413 8.84629133187646 273.7 76.7293606841605 0.82456 31
ILMN_2735415 8.81662828582086 266.3 72.672 0.89724 36
ILMN_2891688 10.8844185007609 819.4 184.377272666671 0 29
ILMN_2637698 11.3030068278757 1061.5 235.580059493583 0 39
ILMN_2674228 9.93932472439213 484.5 127.194 0 36
ILMN_2601546 9.07641483629453 327 97.1721688550791 0.09649 39
ILMN_1230831 8.93508472110224 296.8 83.2380822820901 0.45363 38
ILMN_2848071 9.01655958691152 316.5 102.528185539392 0.16667 30

Total number of rows: 25697

Table truncated, full table size 1526 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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