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Sample GSM926275 Query DataSets for GSM926275
Status Public on May 06, 2012
Title Low_661
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: F2
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description F2 haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.3105547065163 3285.8 750.715758842187 0 46
ILMN_2721178 10.4645787204603 970.8 212.509192377648 0 45
ILMN_3033922 10.8981903815801 1286.4 412.753054307294 0 35
ILMN_3092673 12.7668705730122 4482.7 1213.91142446638 0 50
ILMN_2816356 8.9765762658326 399 140.171179748192 0.30075 37
ILMN_2808939 10.6257227001635 1078.1 283.495406391356 0 45
ILMN_2634564 10.2544276486717 855.6 255.599776310544 0 34
ILMN_2737647 8.96705270888951 395.5 114.612213637989 0.33459 35
ILMN_2734484 11.1473450319191 1515.2 512.504015828169 0 40
ILMN_2952292 9.41249764655629 517.2 146.241159732819 0 52
ILMN_2699078 8.96243807877073 393.8 152.120879191517 0.34962 46
ILMN_1213681 9.71518623370683 619.6 146.099730321449 0 43
ILMN_2735413 8.90349140991066 371.6 111.469665586652 0.61278 26
ILMN_2735415 8.86324158807869 355.5 103.851004679781 0.76817 37
ILMN_2891688 10.7087179060281 1142.2 328.663231895507 0 32
ILMN_2637698 11.5743110294503 2029.9 650.446314810069 0 50
ILMN_2674228 9.78967317115158 645.6 169.270466301715 0 42
ILMN_2601546 9.0069571342338 409.1 138.195560706558 0.19674 39
ILMN_1230831 9.10871676018874 436.5 135.985286968848 0.0401 33
ILMN_2848071 8.94826882690181 388.8 141.041617577933 0.40602 41

Total number of rows: 25697

Table truncated, full table size 1525 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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