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Sample GSM926344 Query DataSets for GSM926344
Status Public on May 06, 2012
Title HS4 High_868_F_H2
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS4
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HS4 Selection haloperidol response High or Low
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 13.2588436432505 17565.76 3287.72040530745 0 44
ILMN_2721178 11.1553441205166 3825.695 766.84640274122 0 35
ILMN_3033922 11.8536482789121 6662.408 1328.8962 0 36
ILMN_3092673 13.7944038765325 24478.82 3370.49641270596 0 51
ILMN_2816356 9.22755545967799 444.7061 198.8754 0.07518797 36
ILMN_2808939 11.4415407893745 4851.719 1341.5469276835 0 34
ILMN_2634564 10.739299901425 2737.856 915.371095660072 0 38
ILMN_2737647 9.20874065364284 430.0889 132.900869969306 0.09649123 44
ILMN_2734484 11.6892933088084 5864.993 1266.11394621489 0 47
ILMN_2952292 9.50201604220116 698.8516 230.486388888428 0.001253133 51
ILMN_2699078 8.99557102814335 269.3784 107.570658836952 0.8909774 35
ILMN_1213681 9.71645848157066 937.5125 328.920194658287 0 55
ILMN_2735413 9.0742198331633 321.8302 110.421927248684 0.4749373 21
ILMN_2735415 9.17410481793286 400.9714 209.105436281951 0.1441103 26
ILMN_2891688 11.4021371141397 4677.498 785.8728 0 36
ILMN_2637698 11.4822227014129 4994.646 1047.20463582151 0 46
ILMN_2674228 10.0875955667778 1438.872 370.620896690979 0 46
ILMN_2601546 9.20376323546456 425.9357 156.40133059788 0.10401 35
ILMN_1230831 9.3138004339784 516.7424 141.81756 0.02756892 36
ILMN_2848071 9.32680339431193 529.2809 168.607964669241 0.02255639 40

Total number of rows: 25697

Table truncated, full table size 1640 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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