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Sample GSM926375 Query DataSets for GSM926375
Status Public on May 06, 2012
Title HS4 Low_842_M _L12
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS4
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HS4 Selection haloperidol response High or Low
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.2349613985378 248.7125 69.4505906039222 0.007518797 41
ILMN_2721178 11.0995066606627 230.4762 68.5702890837599 0.05137845 41
ILMN_3033922 10.4095798083876 222.0371 74.7136729848319 0.10401 44
ILMN_3092673 14.236142127123 335.5957 91.2612272244111 0.001253133 54
ILMN_2816356 9.16270301330163 197.0201 62.1243528994216 0.4887218 43
ILMN_2808939 9.09586449315965 189.6782 59.3505495624384 0.6340852 44
ILMN_2634564 9.1083853256183 191.3335 78.1929487334708 0.60401 27
ILMN_2737647 9.36302527493434 206.4826 83.6645349387373 0.3120301 32
ILMN_2734484 9.33024754643854 205.4948 64.7535136546846 0.3308271 55
ILMN_2952292 10.248423711955 220.033 68.1858934708792 0.1240602 55
ILMN_2699078 9.30531132302242 204.7355 65.8911095237438 0.3446115 43
ILMN_1213681 10.9036509592552 228.0129 71.5815722369158 0.06641604 48
ILMN_2735413 9.02022642053047 174.1098 61.9165890709364 0.8671679 32
ILMN_2735415 9.26966562715802 203.4095 78.87756 0.3709273 36
ILMN_2891688 9.88271169104324 215.5485 86.0814104377072 0.1679198 42
ILMN_2637698 11.8563189879435 241.6336 69.7530779091217 0.02005013 40
ILMN_2674228 9.53315333181238 210.2238 57.585108 0.2406015 36
ILMN_2601546 10.2022412129216 219.5011 81.3950657276103 0.1278196 45
ILMN_1230831 9.15204767468102 196.0866 72.88448325171 0.5112782 33
ILMN_2848071 9.04160345448681 179.5284 64.1133803054776 0.7944862 28

Total number of rows: 25697

Table truncated, full table size 1708 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
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