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Sample GSM926397 Query DataSets for GSM926397
Status Public on May 06, 2012
Title HS4 Low_942_M_L7
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS4
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HS4 Selection haloperidol response High or Low
Data processing lumi R package quintile normalization
 
Submission date May 02, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 13.3468807466461 11934.24 2144.85748480534 0 43
ILMN_2721178 11.3213151008314 2627.569 763.430115706998 0 40
ILMN_3033922 11.6510898045002 3417.519 770.886050297824 0 42
ILMN_3092673 13.8667262039677 16585.09 2669.15287939572 0 54
ILMN_2816356 9.13467218911336 243.7055 84.6031816907875 0.2619048 31
ILMN_2808939 11.3222582744246 2628.861 689.638251462134 0 39
ILMN_2634564 11.0839998946678 2153.82 540.533209259339 0 20
ILMN_2737647 9.15719267937246 252.9397 88.903597797881 0.2092732 26
ILMN_2734484 11.740224240828 3658.944 868.69172279761 0 27
ILMN_2952292 9.63505130991727 495.6419 140.935060049724 0 58
ILMN_2699078 9.05250834125426 208.2521 70.5795101915563 0.6190476 37
ILMN_1213681 9.95448406018903 726.5722 248.844026197365 0 46
ILMN_2735413 9.06725954330047 214.84 69.713607402477 0.5313283 27
ILMN_2735415 9.16854205051546 257.9565 132.078803417399 0.179198 30
ILMN_2891688 11.3946575343905 2812.185 652.575062977938 0 34
ILMN_2637698 11.4491099112839 2952.691 749.349596782703 0 35
ILMN_2674228 10.2502164577465 994.6554 386.583850044744 0 47
ILMN_2601546 9.22334125636439 281.7929 95.8859221062008 0.09774436 31
ILMN_1230831 9.1366855760469 244.6196 86.2571465565173 0.254386 29
ILMN_2848071 9.21738182356901 279.002 79.8147 0.1090226 25

Total number of rows: 25697

Table truncated, full table size 1639 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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