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Sample GSM926416 Query DataSets for GSM926416
Status Public on May 06, 2012
Title HSCC_High_767
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.8503934159067 7576.7 1324.14819425546 0 46
ILMN_2721178 10.9637778465005 2017.2 616.859694295226 0 46
ILMN_3033922 11.2276833003265 2467.3 569.320980635704 0 47
ILMN_3092673 12.7933410424901 7377.9 1393.07814775338 0 53
ILMN_2816356 9.23589799651502 514.2 144.503439959054 0.1391 40
ILMN_2808939 10.8131681892686 1809.4 467.593860203489 0 29
ILMN_2634564 10.1236673337727 1070.8 230.672913071735 0 33
ILMN_2737647 9.13223215750701 461.7 101.393455567901 0.56642 32
ILMN_2734484 11.4909096325899 2993.3 923.312492252758 0 46
ILMN_2952292 9.28960372435684 537.9 165.649193345455 0.03885 54
ILMN_2699078 9.09838013221233 442.4 142.775108989627 0.7406 43
ILMN_1213681 9.93277056895651 918 261.35476846616 0 56
ILMN_2735413 9.21207322905535 503 181.879051504015 0.20426 34
ILMN_2735415 9.1191202881824 453.8 108.821517725126 0.6391 30
ILMN_2891688 10.9437738225522 1988.4 480.889891945131 0 47
ILMN_2637698 10.8178021456961 1813.6 458.642775759087 0 44
ILMN_2674228 10.0039068447666 972.5 228.877209972946 0 45
ILMN_2601546 9.17850391494312 486.4 170.424038146032 0.31579 42
ILMN_1230831 9.30588920766339 545.1 143.20086401974 0.02757 26
ILMN_2848071 9.27694960772604 532.3 169.756539173017 0.05013 32

Total number of rows: 25697

Table truncated, full table size 1522 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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