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Sample GSM926435 Query DataSets for GSM926435
Status Public on May 06, 2012
Title HSCC_High_746
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.932984041552 7594.3 1889.25261435945 0 56
ILMN_2721178 10.7813510018794 1773.8 484.103119165741 0 34
ILMN_3033922 11.0150887919075 2076.5 699.289895868659 0 39
ILMN_3092673 12.7895980379948 6915.4 1810.33273676581 0 46
ILMN_2816356 9.19325543262766 499.8 164.81810541321 0.25439 32
ILMN_2808939 11.1466943856816 2271.1 632.609465285653 0 41
ILMN_2634564 10.3981466638442 1335.1 449.086459674526 0 23
ILMN_2737647 9.10350717581414 451.4 136.072793169685 0.68546 41
ILMN_2734484 11.5806055138828 3062.8 851.374332123655 0 39
ILMN_2952292 9.28457128463617 543.6 188.317976218416 0.03759 47
ILMN_2699078 9.10443138637755 451.9 143.366945730179 0.67544 42
ILMN_1213681 9.96071962774828 951.7 321.657077849999 0 51
ILMN_2735413 9.05811882419988 424.8 176.501687314881 0.8609 33
ILMN_2735415 9.09985511468143 449.3 126.925306578318 0.69925 42
ILMN_2891688 11.0716054593651 2152.1 500.993246585221 0 41
ILMN_2637698 11.5705963748417 3041.7 866.655842225736 0 39
ILMN_2674228 10.0257135986283 997 344.918 0 49
ILMN_2601546 9.18086979634488 493.4 167.789328266133 0.3183 30
ILMN_1230831 9.15167895810644 477.9 96.0873262818776 0.45238 32
ILMN_2848071 9.24306929805096 523.9 183.830875967559 0.09649 31

Total number of rows: 25697

Table truncated, full table size 1517 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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