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Sample GSM926458 Query DataSets for GSM926458
Status Public on May 06, 2012
Title HSCC_High_683
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: High
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: High
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 13.3251367628915 12859.9 3396.06861614043 0 46
ILMN_2721178 11.2406224012221 2733.9 956.199409355601 0 52
ILMN_3033922 11.1089276517051 2447.4 681.03576671934 0 39
ILMN_3092673 13.0266148134306 10278 2619.74817355505 0 45
ILMN_2816356 9.30249656003043 406.7 178.006325595469 0.01754 48
ILMN_2808939 10.9833353581011 2210.4 777.790679224173 0 37
ILMN_2634564 10.2342138502038 1146.9 438.872546549679 0 35
ILMN_2737647 9.15120503232387 330.7 105.930903073655 0.38471 34
ILMN_2734484 11.6026362022146 3606.7 1416.37447050418 0 56
ILMN_2952292 9.37046029352924 444 135.5446917072 0.00501 42
ILMN_2699078 9.2909612780875 400.1 112.064438311179 0.0213 46
ILMN_1213681 10.0149978802058 921.6 207.169837906004 0 42
ILMN_2735413 9.1559426113462 332.9 94.0775007108501 0.34586 35
ILMN_2735415 9.08575078358176 302.3 87.936585526162 0.77569 34
ILMN_2891688 11.6221792004848 3646 1213.00017274195 0 37
ILMN_2637698 10.8253515842486 1930.9 511.581847864054 0 56
ILMN_2674228 10.0693469057211 979 398.321735123756 0 32
ILMN_2601546 9.25561639120774 380.8 152.759334932435 0.05138 41
ILMN_1230831 9.1612495631781 335.4 97.1750217288373 0.32456 33
ILMN_2848071 9.36172206248453 438.9 173.39955330969 0.00501 32

Total number of rows: 25697

Table truncated, full table size 1523 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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