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Sample GSM926478 Query DataSets for GSM926478
Status Public on May 06, 2012
Title HSCC_Low_730
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 13.0247785098239 11563.3 2786.87018060332 0 41
ILMN_2721178 10.8618067366295 2261.2 687.886064054215 0 45
ILMN_3033922 11.2006502160413 2990.2 1037.34091453099 0 40
ILMN_3092673 13.4167238143615 15151.3 4100.47481247453 0 42
ILMN_2816356 9.26819863206238 366.9 110.673404063488 0.02757 23
ILMN_2808939 10.6776475327115 1920.3 602.71246006284 0 35
ILMN_2634564 10.5730891628734 1752.7 608.054680106979 0 35
ILMN_2737647 9.28654271676728 377.5 139.890366909234 0.01504 34
ILMN_2734484 11.1791625261593 2938.5 1008.87416013991 0 38
ILMN_2952292 9.34172038050118 415 141.97994238624 0.00627 40
ILMN_2699078 9.26692016309506 366.3 142.150854116323 0.02757 46
ILMN_1213681 9.8949109981714 867.9 219.655650507789 0 50
ILMN_2735413 9.20470967964 331.3 95.2751796114812 0.16416 26
ILMN_2735415 9.13611183958919 297.7 102.309881946956 0.51003 34
ILMN_2891688 11.2234944214035 3040.9 864.220934715192 0 35
ILMN_2637698 11.8102590276309 4844.6 1314.43674343348 0 58
ILMN_2674228 10.052698767586 1042.8 312.945966658783 0 37
ILMN_2601546 9.16756931600341 312.5 118.714284869177 0.33083 38
ILMN_1230831 9.27022803329687 367.9 195.161276445918 0.02506 31
ILMN_2848071 9.18106459321491 319.1 113.806130362121 0.26441 27

Total number of rows: 25697

Table truncated, full table size 1522 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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