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Sample GSM926479 Query DataSets for GSM926479
Status Public on May 06, 2012
Title HSCC_Low_731
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 13.125592023763 17495.6 4734.42089125713 0 37
ILMN_2721178 11.0316548445838 3547.1 1232.00176824873 0 42
ILMN_3033922 11.2894405814745 4383.2 1311.17266747595 0 54
ILMN_3092673 13.269400357655 19101.7 5230.46506877735 0 52
ILMN_2816356 9.24330755162785 468.3 133.743126208415 0.09023 38
ILMN_2808939 10.9707792665657 3364.4 1186.75305242371 0 37
ILMN_2634564 10.377477685963 1965.2 700.114797611792 0 35
ILMN_2737647 9.25472258260553 478.7 221.738542996025 0.07393 42
ILMN_2734484 11.6328268824638 5719 2294.59094408982 0 51
ILMN_2952292 9.29973308308257 516.6 152.746096617884 0.02757 48
ILMN_2699078 9.25664559195614 480.3 154.354339265211 0.07393 50
ILMN_1213681 9.81538054784577 1055 355.990936154279 0 46
ILMN_2735413 9.16853628636244 411 143.548406469734 0.33083 42
ILMN_2735415 9.06538589164859 349.5 118.721900995562 0.84586 44
ILMN_2891688 11.6735175596002 5895.6 1883.8277049335 0 35
ILMN_2637698 11.4365512076883 4926.7 1406.97400800939 0 46
ILMN_2674228 10.1271376396299 1515.9 754.076191897079 0 34
ILMN_2601546 9.2474090807802 472.2 189.664505261264 0.08647 44
ILMN_1230831 9.19017790758756 426.2 148.200426288186 0.2218 37
ILMN_2848071 9.36254756372539 571.2 291.339551369188 0.00877 28

Total number of rows: 25697

Table truncated, full table size 1527 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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