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Sample GSM926484 Query DataSets for GSM926484
Status Public on May 06, 2012
Title HSCC_Low_693
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.8840137085696 11581.8 3366.6979256696 0 52
ILMN_2721178 10.8649589493632 2664.7 685.350362967731 0 45
ILMN_3033922 11.2894405814745 3717.5 804.05598117544 0 44
ILMN_3092673 13.0556991339588 13025.2 3027.241 0 49
ILMN_2816356 9.19844400439039 571.6 135.642 0.23434 36
ILMN_2808939 10.9066886001731 2764.6 760.673785463914 0 37
ILMN_2634564 10.240919225304 1591.4 597.775767013016 0 27
ILMN_2737647 9.23811918285816 596.7 220.299732544095 0.11404 31
ILMN_2734484 10.9433486604072 2848.3 1007.14331719771 0 39
ILMN_2952292 9.47947994459052 766 205.917908218299 0 53
ILMN_2699078 9.19565939711074 569.9 186.089183737261 0.24311 44
ILMN_1213681 9.80839251150878 1067.9 320.452568970823 0 40
ILMN_2735413 9.12755452629418 525.1 161.616 0.60902 36
ILMN_2735415 9.1858505962368 563.2 223.870375072273 0.29323 35
ILMN_2891688 11.0907724181799 3192.1 962.372108206072 0 37
ILMN_2637698 11.0061024257851 2998.5 727.685837985734 0 45
ILMN_2674228 10.0542816589734 1338.7 451.39263396737 0 44
ILMN_2601546 9.16807344520289 551.5 165.601552492723 0.37845 43
ILMN_1230831 9.33880233688633 663.3 162.182096003227 0.01003 34
ILMN_2848071 9.34407488164675 666.8 213.025817327384 0.00752 32

Total number of rows: 25697

Table truncated, full table size 1525 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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