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Sample GSM926489 Query DataSets for GSM926489
Status Public on May 06, 2012
Title HSCC_Low_776
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 13.1344898680609 9237.9 1799.00825269313 0 42
ILMN_2721178 11.0374647556186 1970.6 394.411398164404 0 42
ILMN_3033922 11.1093885857936 2075.7 537.082092551967 0 60
ILMN_3092673 12.7808683462882 7079.2 1374.55123499272 0 45
ILMN_2816356 9.25449578236684 328.1 91.7402244819578 0.06266 37
ILMN_2808939 11.0252536356396 1951.3 445.13233515439 0 38
ILMN_2634564 10.5055500080965 1255 404.273596250114 0 33
ILMN_2737647 9.28769979521811 344.2 118.900063919243 0.0213 28
ILMN_2734484 11.6897137228912 3166.7 631.743550871713 0 37
ILMN_2952292 9.41274640056754 411.2 113.504193283773 0.00251 53
ILMN_2699078 9.17142504545377 290.4 80.8313470876244 0.31579 48
ILMN_1213681 9.88943092224544 707.6 204.586715502253 0 40
ILMN_2735413 9.10688586956372 265.5 109.629351325272 0.6792 28
ILMN_2735415 9.19240603778342 299.5 108.744258924322 0.21429 41
ILMN_2891688 11.2742052179769 2344.5 578.07700538942 0 40
ILMN_2637698 11.3785615160943 2549.6 595.751358384519 0 33
ILMN_2674228 9.97239887147495 771.1 235.32405435909 0 40
ILMN_2601546 9.33465360443188 368.8 117.476306121703 0.00877 33
ILMN_1230831 9.2108062311517 307.8 144.801956147008 0.15038 26
ILMN_2848071 9.21574189575089 309.9 99.184154359454 0.14035 31

Total number of rows: 25697

Table truncated, full table size 1519 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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