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Sample GSM926490 Query DataSets for GSM926490
Status Public on May 06, 2012
Title HSCC_Low_777
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 13.267049709614 6241.2 1352.4129833627 0 48
ILMN_2721178 11.3286609340053 1730 496.408022537912 0 40
ILMN_3033922 11.3634716188883 1773.8 404.31015921567 0 45
ILMN_3092673 13.0351124876976 5292.1 1222.48689422014 0 35
ILMN_2816356 9.17527167109747 557.1 155.335506736226 0.38221 37
ILMN_2808939 10.8640929599834 1309 313.255344597662 0 39
ILMN_2634564 10.3224056704845 964.5 287.634451413595 0 40
ILMN_2737647 9.09304802524343 510 149.283871975508 0.77569 28
ILMN_2734484 11.9532376299342 2556.9 697.62 0 36
ILMN_2952292 9.5368297895938 658.6 161.227740997013 0.00251 43
ILMN_2699078 9.09188761612616 509.2 149.456217501983 0.7782 38
ILMN_1213681 10.0880709036217 850.1 216.866617514084 0 48
ILMN_2735413 9.00706858778619 452.8 115.759883673058 0.97118 27
ILMN_2735415 9.12342629537794 529 138.765619834309 0.65163 42
ILMN_2891688 11.501906914596 1931.9 587.525144674677 0 33
ILMN_2637698 11.5613641449044 2002 490.6341078268 0 43
ILMN_2674228 10.014457162479 822.3 274.633567558665 0 30
ILMN_2601546 9.41451734214461 629.4 196.097795673485 0.02757 28
ILMN_1230831 9.23043208110165 580.1 116.661571324923 0.20175 19
ILMN_2848071 9.18744702520351 562.6 137.041642722203 0.33333 15

Total number of rows: 25697

Table truncated, full table size 1528 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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