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Sample GSM926493 Query DataSets for GSM926493
Status Public on May 06, 2012
Title HSCC_Low_784
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.773732415891 10366.9 2674.71004472111 0 57
ILMN_2721178 10.7915756353042 2501 570.656385620979 0 50
ILMN_3033922 11.2250036378597 3482.6 915.816166351086 0 38
ILMN_3092673 12.9482967056334 11496.7 2696.37016462466 0 38
ILMN_2816356 9.34202394216648 658.9 201.341943258229 0.01754 35
ILMN_2808939 11.1992729466858 3422.7 946.480111571289 0 34
ILMN_2634564 10.4938647127012 1967.2 632.166141000924 0 33
ILMN_2737647 9.25652239157836 591.5 211.032024181165 0.09023 30
ILMN_2734484 11.3791445422492 3922.7 962.054920777395 0 43
ILMN_2952292 9.21408846870634 558.9 118.746 0.16792 36
ILMN_2699078 9.12029424741352 490.3 186.789327318238 0.61404 50
ILMN_1213681 9.86873480251179 1139.8 372.173980885284 0 43
ILMN_2735413 9.18518615141859 537.3 156.353319478673 0.26692 28
ILMN_2735415 9.24609204275302 583.9 171.412495635528 0.10652 35
ILMN_2891688 11.393718885534 3954.9 1162.4295771878 0 41
ILMN_2637698 11.3826689881455 3929.2 991.816 0 49
ILMN_2674228 9.96311258884109 1243.4 353.280216585928 0 31
ILMN_2601546 9.18344350779644 536.1 144.151641461344 0.27444 46
ILMN_1230831 9.25364048312377 589.4 196.686126417193 0.09649 37
ILMN_2848071 9.26355700317463 597.8 186.575560200151 0.07519 39

Total number of rows: 25697

Table truncated, full table size 1537 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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