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Sample GSM926494 Query DataSets for GSM926494
Status Public on May 06, 2012
Title HSCC_Low_782
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 13.012161196114 6856.6 1620.50489471646 0 50
ILMN_2721178 10.8767003333349 1420.9 356.791251092288 0 46
ILMN_3033922 11.2479535765814 1905.1 473.135517894186 0 37
ILMN_3092673 13.2242898449771 8041.3 2086.30893282083 0 38
ILMN_2816356 9.30022495734887 335.4 105.282026756707 0.01629 38
ILMN_2808939 11.0044911116278 1573.8 441.6430363744 0 42
ILMN_2634564 10.502896993051 1049.6 390.151926661909 0 38
ILMN_2737647 9.23158646846311 312.4 113.869055462843 0.10652 38
ILMN_2734484 11.2276833003265 1885.8 618.371951215448 0 50
ILMN_2952292 9.38082726916355 364.6 113.373151305766 0.00251 53
ILMN_2699078 9.22672024880119 310.7 80.5210166602484 0.1203 44
ILMN_1213681 10.0836170894282 727.1 191.082245344773 0 54
ILMN_2735413 9.2644937870852 323.3 113.568 0.04887 36
ILMN_2735415 9.25199620485523 319 117.44343235788 0.07393 39
ILMN_2891688 11.206059721205 1859 529.272 0 36
ILMN_2637698 11.6785356661987 2631.2 493.608391552453 0 51
ILMN_2674228 10.2267961184623 826.5 302.524966449052 0 53
ILMN_2601546 9.19993700639173 301.7 102.890431916675 0.20927 45
ILMN_1230831 9.21556087196174 307 86.5565957625414 0.15163 30
ILMN_2848071 9.16053918665412 288.4 97.1696579288 0.36717 38

Total number of rows: 25697

Table truncated, full table size 1521 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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