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Sample GSM926496 Query DataSets for GSM926496
Status Public on May 06, 2012
Title HSCC_Low_710
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.9544440931591 7499.6 1489.17052064295 0 42
ILMN_2721178 10.8092005926781 1694.8 436.571404652206 0 40
ILMN_3033922 11.0812192740498 2060.2 495.447821212285 0 56
ILMN_3092673 13.1004400179351 8278.2 1816.416 0 49
ILMN_2816356 9.35353304423128 574.3 155.12869289722 0.0213 40
ILMN_2808939 10.7588812493346 1634.6 499.456015504869 0 34
ILMN_2634564 10.294221178377 1158 355.073879653235 0 27
ILMN_2737647 9.18755956779614 507.2 158.214481954087 0.27945 23
ILMN_2734484 11.2706818630725 2348.4 793.384339940612 0 47
ILMN_2952292 9.25077039029887 534.9 133.466404948961 0.12657 50
ILMN_2699078 9.1075814819179 463.8 143.045740656617 0.69424 45
ILMN_1213681 10.2350486422068 1106.9 362.427367308265 0 46
ILMN_2735413 9.12796637906594 475.4 107.559426699848 0.58772 32
ILMN_2735415 9.10944357922629 464.9 136.247317404784 0.68546 35
ILMN_2891688 11.1744286033778 2201 655.476913399702 0 40
ILMN_2637698 11.6653921999055 3099.9 676.727655707967 0 43
ILMN_2674228 10.1397678291555 1035.7 313.023131471142 0 41
ILMN_2601546 9.25333885854496 535.9 197.898784824465 0.11779 35
ILMN_1230831 9.23742339607307 529.6 149.415362914929 0.14912 27
ILMN_2848071 9.22913463917182 526.1 149.903801242664 0.16667 27

Total number of rows: 25697

Table truncated, full table size 1519 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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