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Sample GSM926497 Query DataSets for GSM926497
Status Public on May 06, 2012
Title HSCC_Low_711
Sample type RNA
 
Source name mouse striatum
Organism Mus musculus
Characteristics tissue: striatum
genetic background: HS-CC
haloperidol response: Low
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description HSCC haloperidol response: Low
Data processing lumi R package quintile normalization
 
Submission date May 03, 2012
Last update date May 06, 2012
Contact name Ovidiu Dan Iancu
E-mail(s) iancuo@ohsu.edu
Organization name OHSU
Street address 3181 SW Sam Jackson Road
City Portland
State/province OR
ZIP/Postal code 97239
Country USA
 
Platform ID GPL6885
Series (1)
GSE37755 Haloperidol response across genetic backgrounds

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_2896528 12.8303101965596 7122.9 1277.03229848544 0 55
ILMN_2721178 10.8047277100056 1678.3 451.136474393282 0 38
ILMN_3033922 11.3257523550717 2472.1 577.535 0 49
ILMN_3092673 13.1344898680609 8782.5 1380.83940121652 0 48
ILMN_2816356 9.33341818730639 416 131.33237876472 0.00752 43
ILMN_2808939 10.9620827609588 1890.8 520.295035092591 0 38
ILMN_2634564 10.1822088419651 990 270.906025034513 0 34
ILMN_2737647 9.18136018161893 344 119.011185474307 0.23684 28
ILMN_2734484 11.4144253857964 2631.5 488.543155383432 0 37
ILMN_2952292 9.3472085779899 423.8 115.367433012961 0.00376 46
ILMN_2699078 9.08871331080218 302.8 95.9123979525066 0.76817 41
ILMN_1213681 9.97265180420603 825.1 223.673978924684 0 52
ILMN_2735413 9.15231045475567 330.9 104.40139668606 0.39599 30
ILMN_2735415 9.153175951804 331.2 110.764762194481 0.39348 34
ILMN_2891688 11.3411410630556 2504.2 684.571256478097 0 44
ILMN_2637698 11.6785356661987 3209.3 685.108680908365 0 41
ILMN_2674228 9.98154809401309 831.1 291.263929208544 0 42
ILMN_2601546 9.31805519467568 408 111.295 0.01253 25
ILMN_1230831 9.26125406728623 380.9 129.683383669613 0.04887 32
ILMN_2848071 9.2265690206613 364.6 140.116491606092 0.09649 20

Total number of rows: 25697

Table truncated, full table size 1520 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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